Documentation read from 05/19/2023 16:24:01 version of /vol/kmer-server-prod/FIGdisk.server.rhel6/FIG/bin/svr_genome_functions.

svr_genome_functions

svr_genome_functions

    svr_genome_functions genome >genes.tbl

List the location and functional assignment for each gene in a specified genome.

This script takes as input a single genome ID as a positional parameter and produces a three-column tab-delimited file containing each gene ID, its "Location String" in SAP, and its functional assignment. The output is to the standard output.

Command-Line Options

url

The URL for the Sapling server, if it is to be different from the default.